Transcript: LINC01909:9

Basic information

LNCipedia transcript ID: LINC01909:9 
LNCipedia gene ID: LINC01909
Location (hg38): chr18:70335337-70339882
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 514 bp
Exons: 4
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00026634; NONHSAT059768
Alternative gene names: XLOC_012709; linc-C18orf55-9


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -165.2813 non-coding 
CPAT coding probability 2.68% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01909:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-SOCS6-1:1
3.1 lnc-SOCS6-1:2
4.0 lnc-SOCS6-1:2
4.1 lnc-SOCS6-1:2
5.0 lnc-SOCS6-1:2
5.1 LINC01909:2
5.2 LINC01909:9