Transcript: LINC01913:15

Basic information

LNCipedia transcript ID: LINC01913:15 
HGNC Gene Symbol: LINC01913    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1913
Ensembl Gene ID: ENSG00000214691
Ensembl Transcript ID: ENST00000442214
Location (hg38): chr2:41877556-41893046
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 741 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000442214; ENST00000442214.1; AC104654.1-002; OTTHUMT00000325743.2
Alternative gene names: ENSG00000214691; AC104654.1; ENSG00000214691.6; OTTHUMG00000152301.3; ENSG00000214691.7; LINC01913


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -70.8923 non-coding 
CPAT coding probability 59.65% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC01913:15 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-PKDCC-2:6
3.1 lnc-PKDCC-2:6
4.0 lnc-PKDCC-2:6
4.1 lnc-PKDCC-2:6
5.0 lnc-PKDCC-2:6
5.1 LINC01913:8
5.2 LINC01913:15