Transcript: LINC01916:3

Basic information

LNCipedia transcript ID: LINC01916:3 
HGNC Gene Symbol: LINC01916    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1916
Ensembl Gene ID: ENSG00000264232
Ensembl Transcript ID: ENST00000582028
Location (hg38): chr18:65424013-65447512
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 559 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000582028.1; RP11-453M23.1-001; OTTHUMT00000442193.1; NONHSAT059699
Alternative gene names: ENSG00000264232.1; RP11-453M23.1; OTTHUMG00000178488.1; LINC01916


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -149.3155 non-coding 
CPAT coding probability 4.45% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01916:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CDH7-2:1
4.0 lnc-CDH7-2:1
4.1 lnc-CDH7-2:1
5.0 lnc-CDH7-2:1
5.1 LINC01916:2
5.2 LINC01916:3