Transcript: LINC01917:7

Basic information

LNCipedia transcript ID: LINC01917:7 
LNCipedia gene ID: LINC01917
Location (hg38): chr18:53579624-53581056
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1033 bp
Exons: 2
Sources: Broad Institute
Alternative transcript names: TCONS_00026206
Alternative gene names: XLOC_012843; linc-MEX3C


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -138.5136 non-coding 
CPAT coding probability 15.66% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01917:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-MBD2-1:1
3.1 lnc-MBD2-1:2
4.0 lnc-MBD2-1:2
4.1 lnc-MBD2-1:2
5.0 lnc-MBD2-1:2
5.1 LINC01917:4
5.2 LINC01917:7