Transcript: LINC01918:23

Basic information

LNCipedia transcript ID: LINC01918:23 
HGNC Gene Symbol: LINC01918    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1918
Ensembl Gene ID: ENSG00000226508
Ensembl Transcript ID: ENST00000452037
Location (hg38): chr2:105144123-105144912
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 515 bp
Exons: 2
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00002965; ENST00000452037; ENST00000452037.1; AC104655.3-002; OTTHUMT00000329372.1; NONHSAT072977
Alternative gene names: XLOC_001609; linc-GPR45-1; ENSG00000226508; AC104655.3; ENSG00000226508.1; OTTHUMG00000153079.1; LINC01918


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -84.3632 non-coding 
CPAT coding probability 14.35% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01918:23 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-MRPS9-3:2
3.1 lnc-MRPS9-3:2
4.0 lnc-MRPS9-3:2
4.1 lnc-GPR45-3:10
5.0 lnc-GPR45-3:10
5.1 LINC01918:12
5.2 LINC01918:23