Transcript: LINC01922:7

Basic information

LNCipedia transcript ID: LINC01922:7 
HGNC Gene Symbol: LINC01922    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1922
Ensembl Gene ID: ENSG00000259779
Ensembl Transcript ID: ENST00000567168
RefSeq ID: NR_131977
Location (hg38): chr18:74409448-74413209
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1704 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000567168.1; RP11-231E4.2-001; OTTHUMT00000431633.1; NONHSAT059871; NR_131977.1
Alternative gene names: ENSG00000259779.1; RP11-231E4.2; OTTHUMG00000176209.1; LINC01922; LOC101927606


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -42.558 non-coding 
CPAT coding probability 20.52% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01922:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C18orf63-1:2
4.0 lnc-C18orf63-1:2
4.1 lnc-C18orf63-1:2
5.0 lnc-C18orf63-1:2
5.1 LINC01922:4
5.2 LINC01922:7