Transcript: LINC01927:10

Basic information

LNCipedia transcript ID: LINC01927:10 
HGNC Gene Symbol: LINC01927    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1927
Ensembl Gene ID: ENSG00000266312
Ensembl Transcript ID: ENST00000582231
Location (hg38): chr18:76623006-76639011
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 712 bp
Exons: 5
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000582231.1; RP11-111H3.3-001; OTTHUMT00000445769.1; NONHSAT059947
Alternative gene names: ENSG00000266312.1; RP11-111H3.3; OTTHUMG00000179326.1; LINC01927


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -103.7228 non-coding 
CPAT coding probability 1.58% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01927:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZNF516-5:3
4.0 lnc-ZNF516-5:3
4.1 lnc-ZNF516-5:3
5.0 lnc-ZNF516-5:3
5.1 LINC01927:4
5.2 LINC01927:10