Transcript: LINC01929:6

Basic information

LNCipedia transcript ID: LINC01929:6 
HGNC Gene Symbol: LINC01929    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1929
Ensembl Gene ID: ENSG00000267013
Ensembl Transcript ID: ENST00000589125
RefSeq ID: NR_110743
Location (hg38): chr18:55105904-55124306
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3067 bp
Exons: 3
Sources: Broad Institute; NONCODE v4; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: TCONS_00026207; NONHSAT059362; ENST00000589125.1; NR_110743; ENST00000589125.5; NR_110743.1
Alternative gene names: XLOC_012848; linc-CCDC68; ENSG00000267013.1; CTD-2171N6.1; ENSG00000267013.5; LINC01929; LOC101927229


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -80.8651 non-coding 
CPAT coding probability 1.41% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01929:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TCF4-1:1
3.1 lnc-TCF4-2:1
4.0 lnc-TCF4-2:1
4.1 lnc-TCF4-2:1
5.0 lnc-TCF4-2:1
5.1 LINC01929:2
5.2 LINC01929:6