Transcript: LINC01938:14

Basic information

LNCipedia transcript ID: LINC01938:14 
LNCipedia gene ID: LINC01938
Location (hg38): chr5:165238549-165241935
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 475 bp
Exons: 4
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00010543; NONHSAT104951
Alternative gene names: XLOC_005071; linc-NUDCD2-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -448.1564 non-coding 
CPAT coding probability 6.07% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01938:14 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-NUDCD2-4:2
3.1 lnc-NUDCD2-6:2
4.0 lnc-NUDCD2-6:2
4.1 lnc-NUDCD2-6:2
5.0 lnc-NUDCD2-6:2
5.1 LINC01938:6
5.2 LINC01938:14