Transcript: LINC01940:9

Basic information

LNCipedia transcript ID: LINC01940:9 
LNCipedia gene ID: LINC01940
Location (hg38): chr2:238919082-238947973
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 9206 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000227744.4|MICT00000210848.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 14.0637 non-coding 
CPAT coding probability 96.06% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC01940:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-HDAC4-3:5
5.0 lnc-HDAC4-3:5
5.1 LINC01940:2
5.2 LINC01940:9