Transcript: LINC01953:5

Basic information

LNCipedia transcript ID: LINC01953:5 
LNCipedia gene ID: LINC01953
Location (hg38): chr2:213158899-213167664
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 655 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00004569; NONHSAT076707
Alternative gene names: XLOC_002476; linc-IKZF2-3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -155.7473 non-coding 
CPAT coding probability 6.09% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01953:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-IKZF2-1:2
3.1 lnc-IKZF2-1:2
4.0 lnc-IKZF2-1:2
4.1 lnc-IKZF2-1:2
5.0 lnc-IKZF2-1:2
5.1 LINC01953:3
5.2 LINC01953:5