Transcript: LINC01960:3

Basic information

LNCipedia transcript ID: LINC01960:3 
LNCipedia gene ID: LINC01960
RefSeq ID: NR_136175
Location (hg38): chr2:174025280-174027158
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1879 bp
Exons: 1
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_136175.1
Alternative gene names: LOC100128905


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -127.2993 non-coding 
CPAT coding probability 66.74% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC01960:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 LINC01960:3
5.1 LINC01960:3
5.2 LINC01960:3