Transcript: LINC01974:5

Basic information

LNCipedia transcript ID: LINC01974:5 
HGNC Gene Symbol: LINC01974    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1974
Ensembl Gene ID: ENSG00000262031
Ensembl Transcript ID: ENST00000575126
Location (hg38): chr17:46909742-46911512
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 494 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000575126.1; RP11-63A1.2-001; OTTHUMT00000440435.1; NONHSAT146908
Alternative gene names: ENSG00000262031.1; RP11-63A1.2; OTTHUMG00000178078.1; LINC01974


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -283.9094 non-coding 
CPAT coding probability 0.13% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01974:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RPRML-2:1
4.0 lnc-RPRML-2:1
4.1 lnc-RPRML-2:1
5.0 lnc-RPRML-2:1
5.1 LINC01974:3
5.2 LINC01974:5