Transcript: LINC01977:8

Basic information

LNCipedia transcript ID: LINC01977:8 
LNCipedia gene ID: LINC01977
Location (hg38): chr17:79817723-79819588
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 397 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00025520; NONHSAT056316
Alternative gene names: XLOC_012333; linc-CCDC40-3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -100.2119 non-coding 
CPAT coding probability 2.31% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01977:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CBX2-1:1
3.1 lnc-CBX2-2:1
4.0 lnc-CBX2-2:1
4.1 lnc-CBX2-2:1
5.0 lnc-CBX2-2:1
5.1 LINC01977:3
5.2 LINC01977:8