Transcript: LINC01978:20

Basic information

LNCipedia transcript ID: LINC01978:20 
LNCipedia gene ID: LINC01978
Location (hg38): chr17:79919374-79925462
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 540 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000262188.1|ENST00000572353.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -123.7013 non-coding 
CPAT coding probability 0.85% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01978:20 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-CCDC40-2:9
5.0 lnc-CCDC40-2:9
5.1 LINC01978:9
5.2 LINC01978:20