Transcript: LINC01989:14

Basic information

LNCipedia transcript ID: LINC01989:14 
HGNC Gene Symbol: LINC01989    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1989
Ensembl Gene ID: ENSG00000261156
Ensembl Transcript ID: ENST00000566930
Location (hg38): chr17:34169372-34183632
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1081 bp
Exons: 6
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000566930.2; RP11-215E13.1-001; OTTHUMT00000431405.2; NONHSAT053011; ENST00000566930.6
Alternative gene names: ENSG00000261156.2; RP11-215E13.1; OTTHUMG00000176032.2; ENSG00000261156.6; LINC01989


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -147.9883 non-coding 
CPAT coding probability 0.24% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01989:14 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ACCN1-1:3
4.0 lnc-ACCN1-1:3
4.1 lnc-ACCN1-1:3
5.0 lnc-ACCN1-1:3
5.1 LINC01989:5
5.2 LINC01989:14