Transcript: LINC01989:15

Basic information

LNCipedia transcript ID: LINC01989:15 
HGNC Gene Symbol: LINC01989    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1989
Ensembl Gene ID: ENSG00000261156
Ensembl Transcript ID: ENST00000584724
Location (hg38): chr17:34169372-34182845
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 273 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000584724.1; RP11-215E13.1-003; OTTHUMT00000447584.1; NONHSAT053010; ENST00000584724.5
Alternative gene names: ENSG00000261156.2; RP11-215E13.1; OTTHUMG00000176032.2; ENSG00000261156.6; LINC01989


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -199.4354 non-coding 
CPAT coding probability 0.09% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01989:15 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ACCN1-1:5
4.0 lnc-ACCN1-1:5
4.1 lnc-ACCN1-1:5
5.0 lnc-ACCN1-1:5
5.1 LINC01989:6
5.2 LINC01989:15