Transcript: LINC01991:8

Basic information

LNCipedia transcript ID: LINC01991:8 
HGNC Gene Symbol: LINC01991    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1991
Ensembl Gene ID: ENSG00000224187
Ensembl Transcript ID: ENST00000423643
Location (hg38): chr3:187958775-187966967
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 428 bp
Exons: 2
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00005911; ENST00000423643; ENST00000423643.1; RP11-132N15.3-002; OTTHUMT00000344055.1; NONHSAT093900
Alternative gene names: XLOC_003365; linc-BCL6-6; ENSG00000224187; RP11-132N15.3; ENSG00000224187.1; OTTHUMG00000156391.1; LINC01991


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -239.5227 non-coding 
CPAT coding probability 1.32% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01991:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-BCL6-3:2
3.1 lnc-BCL6-3:2
4.0 lnc-BCL6-3:2
4.1 lnc-BCL6-3:2
5.0 lnc-BCL6-3:2
5.1 LINC01991:5
5.2 LINC01991:8