Transcript: LINC01995:4

Basic information

LNCipedia transcript ID: LINC01995:4 
HGNC Gene Symbol: LINC01995    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1995
Ensembl Gene ID: ENSG00000244247
Ensembl Transcript ID: ENST00000489016
Location (hg38): chr3:182498264-182507124
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 621 bp
Exons: 4
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000489016; ENST00000489016.1; RP11-139K4.2-001; OTTHUMT00000350614.1; NONHSAT093618
Alternative gene names: ENSG00000244247; RP11-139K4.2; ENSG00000244247.1; OTTHUMG00000158301.1; LINC01995


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -153.5575 non-coding 
CPAT coding probability 0.71% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01995:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-DCUN1D1-3:1
3.1 lnc-DCUN1D1-4:1
4.0 lnc-DCUN1D1-4:1
4.1 lnc-DCUN1D1-4:1
5.0 lnc-DCUN1D1-4:1
5.1 LINC01995:2
5.2 LINC01995:4