Transcript: LINC01996:4

Basic information

LNCipedia transcript ID: LINC01996:4 
LNCipedia gene ID: LINC01996
Location (hg38): chr17:4610449-4617649
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1272 bp
Exons: 2
Sources: Biogazelle lncRNA chip
Alternative transcript names: ENST00000512682
Alternative gene names: ENSG00000250077


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -8.6717 non-coding 
CPAT coding probability 15.11% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01996:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-SMTNL2-1:1
3.1 lnc-SMTNL2-1:1
4.0 lnc-SMTNL2-1:1
4.1 lnc-SMTNL2-1:1
5.0 lnc-SMTNL2-1:1
5.1 LINC01996:2
5.2 LINC01996:4