Transcript: LINC02006:7

Basic information

LNCipedia transcript ID: LINC02006:7 
HGNC Gene Symbol: LINC02006    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2006
Ensembl Gene ID: ENSG00000238755
Ensembl Transcript ID: ENST00000493214
Location (hg38): chr3:153385109-153762526
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 812 bp
Exons: 7
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000493214.2; RP11-23D24.2-001; OTTHUMT00000356965.2; NONHSAT092784
Alternative gene names: ENSG00000240456.2; RP11-23D24.2; OTTHUMG00000159707.3; ENSG00000238755.3; LINC02006


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -99.3937 non-coding 
CPAT coding probability 3.06% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02006:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DHX36-2:2
4.0 lnc-DHX36-2:2
4.1 lnc-DHX36-2:2
5.0 lnc-DHX36-2:2
5.1 LINC02006:3
5.2 LINC02006:7