Transcript: LINC02006:8

Basic information

LNCipedia transcript ID: LINC02006:8 
LNCipedia gene ID: LINC02006
Location (hg38): chr3:153534543-153762525
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 380 bp
Exons: 5
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00005851; NONHSAT092787
Alternative gene names: XLOC_003293; linc-TMEM14E-3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -103.1752 non-coding 
CPAT coding probability 8.80% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02006:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-DHX36-1:2
3.1 lnc-DHX36-2:3
4.0 lnc-DHX36-2:3
4.1 lnc-DHX36-2:3
5.0 lnc-DHX36-2:3
5.1 LINC02006:4
5.2 LINC02006:8