Transcript: LINC02015:32

Basic information

LNCipedia transcript ID: LINC02015:32 
LNCipedia gene ID: LINC02015
Ensembl Gene ID: ENSG00000225790
Ensembl Transcript ID: ENST00000450500
Location (hg38): chr3:177934823-177937662
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 560 bp
Exons: 3
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00005666; ENST00000450500; ENST00000450500.1; RP11-2L8.1-001; OTTHUMT00000348197.1; NONHSAT093361
Alternative gene names: XLOC_002935; linc-KCNMB2-1; ENSG00000225790; RP11-2L8.1; ENSG00000225790.1; OTTHUMG00000157253.1; AC007953.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -47.6656 non-coding 
CPAT coding probability 1.18% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02015:32 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-KCNMB2-1:1
3.1 lnc-KCNMB2-1:1
4.0 lnc-KCNMB2-1:1
4.1 lnc-KCNMB2-1:1
5.0 lnc-KCNMB2-1:1
5.1 LINC02015:16
5.2 LINC02015:32