Transcript: LINC02020:25

Basic information

LNCipedia transcript ID: LINC02020:25 
LNCipedia gene ID: LINC02020
Location (hg38): chr3:186441772-186446531
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1936 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00007059; NONHSAT093818
Alternative gene names: XLOC_002958; linc-DNAJB11-3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -7.2891 non-coding 
CPAT coding probability 1.47% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02020:25 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-DNAJB11-3:11
3.1 lnc-DNAJB11-3:11
4.0 lnc-DNAJB11-3:11
4.1 lnc-DNAJB11-3:11
5.0 lnc-DNAJB11-3:11
5.1 LINC02020:13
5.2 LINC02020:25