Transcript: LINC02050:16

Basic information

LNCipedia transcript ID: LINC02050:16 
LNCipedia gene ID: LINC02050
Location (hg38): chr3:80770608-80788996
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 18389 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000242781.1|ENCT00000290699.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 1 coding 
Peptide Confidence Reading frame
DRRESMEAEAIER 92.3076923076923% sense-1
Lee translation initiation sites non-coding 
PhyloCSF score 9.6919 non-coding 
CPAT coding probability 0.33% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC02050:16 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ROBO2-4:7
5.0 lnc-ROBO2-4:7
5.1 LINC02050:4
5.2 LINC02050:16