Transcript: LINC02050:25

Basic information

LNCipedia transcript ID: LINC02050:25 
LNCipedia gene ID: LINC02050
Location (hg38): chr3:80847524-80872057
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1571 bp
Exons: 6
Sources: Nielsen et al.,2014
Alternative transcript names: l_2398_chr3:80896674-80921208_testes
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 22.627 non-coding 
CPAT coding probability 2.51% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02050:25 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ROBO2-13:1
4.0 lnc-ROBO2-13:1
4.1 lnc-ROBO2-4:12
5.0 lnc-ROBO2-4:12
5.1 LINC02050:13
5.2 LINC02050:25