Transcript: LINC02065:5

Basic information

LNCipedia transcript ID: LINC02065:5 
HGNC Gene Symbol: LINC02065    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2065
Ensembl Gene ID: ENSG00000248846
Ensembl Transcript ID: ENST00000509924
Location (hg38): chr5:66206212-66209447
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 562 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000509924; ENST00000509924.2; CTD-2016O11.1-001; OTTHUMT00000377187.1
Alternative gene names: ENSG00000248846; CTD-2016O11.1; ENSG00000248846.2; OTTHUMG00000164089.1; LINC02065


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -60.7705 non-coding 
CPAT coding probability 11.33% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02065:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-SGTB-2:1
3.1 lnc-SGTB-3:1
4.0 lnc-SGTB-3:1
4.1 lnc-SGTB-3:1
5.0 lnc-SGTB-3:1
5.1 LINC02065:2
5.2 LINC02065:5