Transcript: LINC02076:9

Basic information

LNCipedia transcript ID: LINC02076:9 
HGNC Gene Symbol: LINC02076    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2076
Ensembl Gene ID: ENSG00000220161
Ensembl Transcript ID: ENST00000577684
Location (hg38): chr17:18411159-18414380
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1871 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000577684.1; RP1-37N7.3-001; OTTHUMT00000447480.1; NONHSAT146362
Alternative gene names: ENSG00000220161.3; RP1-37N7.3; OTTHUMG00000179643.1; ENSG00000220161.4; FLJ35934; LINC02076


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 92.3061 coding 
CPAT coding probability 30.57% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC02076:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AL353997.5.1-2:2
4.0 lnc-AL353997.1-2:2
4.1 lnc-AL353997.1-2:2
5.0 lnc-AL353997.1-2:2
5.1 LINC02076:3
5.2 LINC02076:9