Transcript: LINC02081:18

Basic information

LNCipedia transcript ID: LINC02081:18 
LNCipedia gene ID: LINC02081
Location (hg38): chr17:78617376-78632067
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 6944 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000267123.1|MICT00000155639.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 48.6738 non-coding 
CPAT coding probability 1.27% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC02081:18 no no no no

Available literature

  1. Fu (2017), Deregulated lncRNAs in B Cells from Patients with Active Tuberculosis., PLoS ONE
  2. Fan (2016), Identification of a RNA-Seq Based 8-Long Non-Coding RNA Signature Predicting Survival in Esophageal Cancer., Med. Sci. Monit.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-DNAH17-1:10
5.0 lnc-DNAH17-1:10
5.1 LINC02081:4
5.2 LINC02081:18