Transcript: LINC02093:3

Basic information

LNCipedia transcript ID: LINC02093:3 
HGNC Gene Symbol: LINC02093    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2093
Ensembl Gene ID: ENSG00000234634
Ensembl Transcript ID: ENST00000440522
Location (hg38): chr17:13299184-13306760
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 485 bp
Exons: 5
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000440522; ENST00000440522.1; AC003664.1-001; OTTHUMT00000129954.1; NONHSAT145719
Alternative gene names: ENSG00000234634; AC003664.1; ENSG00000234634.1; OTTHUMG00000058770.1; LINC02093


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 0.8702 non-coding 
CPAT coding probability 1.16% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02093:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-HS3ST3A1-3:1
3.1 lnc-HS3ST3A1-3:1
4.0 lnc-HS3ST3A1-3:1
4.1 lnc-HS3ST3A1-3:1
5.0 lnc-HS3ST3A1-3:1
5.1 LINC02093:2
5.2 LINC02093:3