Transcript: LINC02097:5

Basic information

LNCipedia transcript ID: LINC02097:5 
LNCipedia gene ID: LINC02097
Location (hg38): chr17:72089512-72093037
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 272 bp
Exons: 2
Sources: Broad Institute
Alternative transcript names: TCONS_00025480
Alternative gene names: XLOC_012300; linc-SOX9-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -193.9118 non-coding 
CPAT coding probability 0.46% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02097:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-SOX9-1:2
3.1 lnc-SOX9-1:2
4.0 lnc-SOX9-1:2
4.1 lnc-SOX9-1:2
5.0 lnc-SOX9-1:2
5.1 LINC02097:3
5.2 LINC02097:5