Transcript: LINC02098:8

Basic information

LNCipedia transcript ID: LINC02098:8 
HGNC Gene Symbol: LINC02098    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2098
Ensembl Gene ID: ENSG00000272575
Ensembl Transcript ID: ENST00000609260
Location (hg38): chr11:128211437-128241433
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 554 bp
Exons: 3
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000609260.1
Alternative gene names: ENSG00000272575.1; RP11-702B10.1; ENSG00000272575.5; LINC02098


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -126.9497 non-coding 
CPAT coding probability 0.42% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02098:8 no no no no

Available literature

  1. Guo (2016), Protein-coding genes combined with long non-coding RNAs predict prognosis in esophageal squamous cell carcinoma patients as a novel clinical multi-dimensional signature., Mol Biosyst


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-1007G5.2.1-3:3
4.0 lnc-RP11-1007G5.2.1-3:3
4.1 lnc-RP11-1007G5.2.1-3:3
5.0 lnc-RP11-1007G5.2.1-3:3
5.1 LINC02098:4
5.2 LINC02098:8