Transcript: LINC02098:9

Basic information

LNCipedia transcript ID: LINC02098:9 
LNCipedia gene ID: LINC02098
Location (hg38): chr11:128211463-128214029
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 305 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00019531; NONHSAT025060
Alternative gene names: XLOC_009326; linc-FLI1-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -213.3548 non-coding 
CPAT coding probability 0.14% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02098:9 no no no no

Available literature

  1. Guo (2016), Protein-coding genes combined with long non-coding RNAs predict prognosis in esophageal squamous cell carcinoma patients as a novel clinical multi-dimensional signature., Mol Biosyst


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RP11-1007G5.2.1-2:1
3.1 lnc-RP11-1007G5.2.1-3:1
4.0 lnc-RP11-1007G5.2.1-3:1
4.1 lnc-RP11-1007G5.2.1-3:1
5.0 lnc-RP11-1007G5.2.1-3:1
5.1 LINC02098:5
5.2 LINC02098:9