Transcript: LINC02099:11

Basic information

LNCipedia transcript ID: LINC02099:11 
LNCipedia gene ID: LINC02099
RefSeq ID: NR_125814
Location (hg38): chr8:29748309-29798492
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2333 bp
Exons: 4
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_125814; NR_125814.1
Alternative gene names: LOC101929450


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 0.589 non-coding 
CPAT coding probability 29.15% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02099:11 no no no no

Available literature

  1. Wu (2016), Tissue-specific Co-expression of Long Non-coding and Coding RNAs Associated with Breast Cancer., Sci Rep
  2. Zhang (2016), Long noncoding RNA expression profile in fibroblast-like synoviocytes from patients with rheumatoid arthritis., Arthritis Res. Ther.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-LEPROTL1-4:8
4.0 lnc-LEPROTL1-4:8
4.1 lnc-LEPROTL1-4:8
5.0 lnc-LEPROTL1-4:8
5.1 LINC02099:3
5.2 LINC02099:11