Transcript: LINC02101:9

Basic information

LNCipedia transcript ID: LINC02101:9 
LNCipedia gene ID: LINC02101
Location (hg38): chr5:58111895-58118503
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 404 bp
Exons: 4
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT101597; FPKM1_group_25419_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -234.5617 non-coding 
CPAT coding probability 3.48% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02101:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PLK2-1:4
4.0 lnc-PLK2-1:4
4.1 lnc-PLK2-1:4
5.0 lnc-PLK2-1:4
5.1 LINC02101:5
5.2 LINC02101:9