Transcript: LINC02109:31

Basic information

LNCipedia transcript ID: LINC02109:31 
LNCipedia gene ID: LINC02109
Location (hg38): chr5:29143508-29183321
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1899 bp
Exons: 11
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT100838; FPKM1_group_25154_transcript_8
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 11.9402 non-coding 
CPAT coding probability 3.47% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02109:31 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CDH6-2:18
4.0 lnc-CDH6-2:18
4.1 lnc-CDH6-2:18
5.0 lnc-CDH6-2:18
5.1 LINC02109:4
5.2 LINC02109:31