Transcript: LINC02112:28

Basic information

LNCipedia transcript ID: LINC02112:28 
LNCipedia gene ID: LINC02112
Location (hg38): chr5:9629446-9712378
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 754 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000514078.1; CTD-2143L24.1-003; OTTHUMT00000365725.1; NONHSAT100373
Alternative gene names: ENSG00000249781.1; CTD-2143L24.1; OTTHUMG00000161688.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -50.5769 non-coding 
CPAT coding probability 45.05% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC02112:28 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TAS2R1-2:2
4.0 lnc-TAS2R1-2:2
4.1 lnc-TAS2R1-2:2
5.0 lnc-TAS2R1-2:2
5.1 LINC02112:13
5.2 LINC02112:28