Transcript: LINC02112:30

Basic information

LNCipedia transcript ID: LINC02112:30 
LNCipedia gene ID: LINC02112
Location (hg38): chr5:9629729-9712200
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 454 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000506620.1; CTD-2143L24.1-004; OTTHUMT00000365726.1; NONHSAT100374
Alternative gene names: ENSG00000249781.1; CTD-2143L24.1; OTTHUMG00000161688.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -677.558 non-coding 
CPAT coding probability 4.10% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02112:30 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TAS2R1-2:3
4.0 lnc-TAS2R1-2:3
4.1 lnc-TAS2R1-2:3
5.0 lnc-TAS2R1-2:3
5.1 LINC02112:15
5.2 LINC02112:30