Transcript: LINC02120:5

Basic information

LNCipedia transcript ID: LINC02120:5 
LNCipedia gene ID: LINC02120
Location (hg38): chr5:32947443-32962465
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2006 bp
Exons: 6
Sources: Broad Institute
Alternative transcript names: TCONS_00009212
Alternative gene names: XLOC_004330; linc-TARS-3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 0.0411 non-coding 
CPAT coding probability 32.55% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02120:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-NPR3-1:1
3.1 lnc-NPR3-1:2
4.0 lnc-AC026703.1-1:1
4.1 lnc-AC026703.1-1:1
5.0 lnc-AC026703.1-1:1
5.1 LINC02120:2
5.2 LINC02120:5