Transcript: LINC02129:4

Basic information

LNCipedia transcript ID: LINC02129:4 
LNCipedia gene ID: LINC02129
Location (hg38): chr16:27158454-27176587
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 689 bp
Exons: 4
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000564381.1; RP11-673P17.4-001; OTTHUMT00000434963.1; NONHSAT141429
Alternative gene names: ENSG00000261045.1; RP11-673P17.4; OTTHUMG00000177036.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -60.7494 non-coding 
CPAT coding probability 5.06% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02129:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NSMCE1-2:1
4.0 lnc-NSMCE1-2:1
4.1 lnc-NSMCE1-2:1
5.0 lnc-NSMCE1-2:1
5.1 LINC02129:2
5.2 LINC02129:4