Transcript: LINC02129:5

Basic information

LNCipedia transcript ID: LINC02129:5 
HGNC Gene Symbol: LINC02129    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2129
Ensembl Gene ID: ENSG00000261045
Ensembl Transcript ID: ENST00000564381
Location (hg38): chr16:27158451-27176587
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 692 bp
Exons: 4
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000564381.2
Alternative gene names: ENSG00000261045.2; RP11-673P17.4; LINC02129


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -60.7494 non-coding 
CPAT coding probability 5.06% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02129:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-NSMCE1-2:2
4.1 lnc-NSMCE1-2:2
5.0 lnc-NSMCE1-2:2
5.1 LINC02129:3
5.2 LINC02129:5