Transcript: LINC02131:3

Basic information

LNCipedia transcript ID: LINC02131:3 
HGNC Gene Symbol: LINC02131    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2131
Ensembl Gene ID: ENSG00000261154
Ensembl Transcript ID: ENST00000563289
Location (hg38): chr16:77590806-77610681
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 419 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000563289.1; RP11-571O6.1-001; OTTHUMT00000434007.1; NONHSAT143805
Alternative gene names: ENSG00000261154.1; RP11-571O6.1; OTTHUMG00000176842.1; LINC02131


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -89.5145 non-coding 
CPAT coding probability 2.04% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02131:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NUDT7-2:1
4.0 lnc-NUDT7-2:1
4.1 lnc-NUDT7-2:1
5.0 lnc-NUDT7-2:1
5.1 LINC02131:2
5.2 LINC02131:3