Transcript: LINC02136:4

Basic information

LNCipedia transcript ID: LINC02136:4 
HGNC Gene Symbol: LINC02136    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2136
Ensembl Gene ID: ENSG00000261348
Ensembl Transcript ID: ENST00000567469
Location (hg38): chr16:71410440-71426464
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 530 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000567469.1; RP11-510M2.1-001; OTTHUMT00000433792.1; NONHSAT143471
Alternative gene names: ENSG00000261348.1; RP11-510M2.1; OTTHUMG00000176795.1; LINC02136


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -121.1956 non-coding 
CPAT coding probability 7.85% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02136:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZNF23-3:1
4.0 lnc-ZNF23-3:1
4.1 lnc-ZNF23-3:1
5.0 lnc-ZNF23-3:1
5.1 LINC02136:2
5.2 LINC02136:4