Transcript: LINC02139:10

Basic information

LNCipedia transcript ID: LINC02139:10 
LNCipedia gene ID: LINC02139
Location (hg38): chr16:85142682-85151641
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 5279 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT144107
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 11.756 non-coding 
CPAT coding probability 70.75% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC02139:10 no no no no

Available literature

  1. Bannon (2015), Identification of long noncoding RNAs dysregulated in the midbrain of human cocaine abusers., J. Neurochem.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-KIAA0513-1:6
4.0 lnc-KIAA0513-1:6
4.1 lnc-KIAA0513-1:6
5.0 lnc-KIAA0513-1:6
5.1 LINC02139:5
5.2 LINC02139:10