Transcript: LINC02143:6

Basic information

LNCipedia transcript ID: LINC02143:6 
LNCipedia gene ID: LINC02143
Location (hg38): chr5:164448245-164469920
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 909 bp
Exons: 5
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00011080; NONHSAT104933
Alternative gene names: XLOC_005070; linc-NUDCD2-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -127.4692 non-coding 
CPAT coding probability 3.63% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02143:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-NUDCD2-3:1
3.1 lnc-NUDCD2-5:1
4.0 lnc-NUDCD2-5:1
4.1 lnc-NUDCD2-5:1
5.0 lnc-NUDCD2-5:1
5.1 LINC02143:2
5.2 LINC02143:6