Transcript: LINC02150:8

Basic information

LNCipedia transcript ID: LINC02150:8 
HGNC Gene Symbol: LINC02150    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2150
Ensembl Gene ID: ENSG00000248150
Ensembl Transcript ID: ENST00000513157
Location (hg38): chr5:16373361-16440081
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2120 bp
Exons: 8
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00009610; ENST00000513157; ENST00000513157.1; RP1-167G20.1-001; OTTHUMT00000366089.1; NONHSAT100598
Alternative gene names: XLOC_004743; linc-MARCH11-1; ENSG00000248150; RP1-167G20.1; ENSG00000248150.1; OTTHUMG00000161787.1; LINC02150


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -6.5005 non-coding 
CPAT coding probability 6.27% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02150:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ZNF622-1:1
3.1 lnc-ZNF622-1:1
4.0 lnc-ZNF622-1:1
4.1 lnc-ZNF622-1:1
5.0 lnc-ZNF622-1:1
5.1 LINC02150:3
5.2 LINC02150:8