Transcript: LINC02152:3

Basic information

LNCipedia transcript ID: LINC02152:3 
HGNC Gene Symbol: LINC02152    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2152
Ensembl Gene ID: ENSG00000261319
Ensembl Transcript ID: ENST00000566208
Location (hg38): chr16:8298492-8299772
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1281 bp
Exons: 1
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000566208.1; RP11-279O17.1-001; OTTHUMT00000431438.1; NONHSAT140386
Alternative gene names: ENSG00000261319.1; RP11-279O17.1; OTTHUMG00000176058.1; LINC02152


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -69.7814 non-coding 
CPAT coding probability 7.04% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02152:3 no no no no

Available literature

  1. Cui (2016), Long Non-Coding RNA: Potential Diagnostic and Therapeutic Biomarker for Major Depressive Disorder., Med. Sci. Monit.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-METTL22-3:1
4.0 lnc-METTL22-3:1
4.1 lnc-METTL22-3:1
5.0 lnc-METTL22-3:1
5.1 LINC02152:2
5.2 LINC02152:3