Transcript: LINC02153:22

Basic information

LNCipedia transcript ID: LINC02153:22 
LNCipedia gene ID: LINC02153
Location (hg38): chr8:20953426-20969319
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1593 bp
Exons: 5
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00014642; NONHSAT125411
Alternative gene names: XLOC_006734; linc-XPO7-4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -103.0918 non-coding 
CPAT coding probability 1.49% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02153:22 no no no no

Available literature

  1. Cui (2016), Long Non-Coding RNA: Potential Diagnostic and Therapeutic Biomarker for Major Depressive Disorder., Med. Sci. Monit.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ATP6V1B2-4:2
3.1 lnc-ATP6V1B2-5:2
4.0 lnc-ATP6V1B2-5:2
4.1 lnc-ATP6V1B2-5:2
5.0 lnc-ATP6V1B2-5:2
5.1 LINC02153:4
5.2 LINC02153:22