Transcript: LINC02156:10

Basic information

LNCipedia transcript ID: LINC02156:10 
LNCipedia gene ID: LINC02156
Location (hg38): chr12:47418014-47420239
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 769 bp
Exons: 2
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT027923; FPKM1_group_6167_transcript_3
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -39.7273 non-coding 
CPAT coding probability 30.77% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02156:10 no no no no

Available literature

  1. Fan (2016), Identification of a RNA-Seq Based 8-Long Non-Coding RNA Signature Predicting Survival in Esophageal Cancer., Med. Sci. Monit.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FAM113B-4:5
4.0 lnc-FAM113B-4:5
4.1 lnc-FAM113B-4:5
5.0 lnc-FAM113B-4:5
5.1 LINC02156:5
5.2 LINC02156:10