Transcript: LINC02156:8

Basic information

LNCipedia transcript ID: LINC02156:8 
LNCipedia gene ID: LINC02156
Location (hg38): chr12:47414684-47420239
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 867 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00021113; NONHSAT027920
Alternative gene names: XLOC_009728; linc-SLC48A1-3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -39.7273 non-coding 
CPAT coding probability 3.67% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02156:8 no no no no

Available literature

  1. Fan (2016), Identification of a RNA-Seq Based 8-Long Non-Coding RNA Signature Predicting Survival in Esophageal Cancer., Med. Sci. Monit.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-FAM113B-4:2
3.1 lnc-FAM113B-4:2
4.0 lnc-FAM113B-4:2
4.1 lnc-FAM113B-4:2
5.0 lnc-FAM113B-4:2
5.1 LINC02156:3
5.2 LINC02156:8